Isoid

Just wanted to say that changing the setting in the .toml file fixed this issue for me, so for anyone else finding this on the internet with a similar problem consider trying it if you have the mod installed. I didn't need to set the plugins file to read only though. You'll know it worked if you were previously not being warned about mods being enabled/achievements disabled, and when you change this it warns you about it before the game starts. Thanks for the comment