Mod Organizer and NMM are completely different programs although both are mod managers. If you're going to use Mod Organizer make sure you read all of its documentation about installing things, especially things like SKSE. You can't actually install SKSE using a mod manager although some people package the SKSE scripts and install them with Mod Organizer. The official support for Mod Organizer is over on the STEP forums. Its working just fine now, seems like something wasn't up to date, I think it was skyrim, anyway Txs 4 ur help.