I can't claim to know what's wrong since I too am having issues getting body physics to work. That said, I believe the 'Skeletal adjustments for CBBE' is itself a skeleton mod and not compatible with 'ZeX'. I think they can both be in your game if you use 'Gender Specific Skeletons (GSS)' and give females the CBBE one and ZeX for males.
Need help/guide in which order and how to install all those mods about OCBP, the skeletal adjustments, 3BBB and etc. (Fallout 4)
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I can't claim to know what's wrong since I too am having issues getting body physics to work.
That said, I believe the 'Skeletal adjustments for CBBE' is itself a skeleton mod and not compatible with 'ZeX'.
I think they can both be in your game if you use 'Gender Specific Skeletons (GSS)' and give females the CBBE one and ZeX for males.
Gender Specific Skeletons: https://www.nexusmods.com/fallout4/mods/40866