Salaldin

So before the patch everything worked running cloudy01smodmnger, bagglow, chetmod, perkloadout, uhpmap. I got a SFE error because the new patch so i updated it as normal. When i went to run the game it loaded without any mods.... I updated all my mods to current versions and the problem still was there,. After a little research of why this was happening i realized that everytime i started the game it wrote its own ini instead of using my custom one. I dont know if this is the true issue but seems pretty likely as i didnt have that before. Is this normal? Any clue? Any help is appreciated