Here's how I got mine to work. Update to the newest version of NMM (0.61.20), make sure you got a profile saved. If your mods are showing, but not marked: click on the green check mark, uninstall any mod that changes the UI, then click on the icon below the green check mark and choose "Export to a text file". If your mods are NOT showing: reinstall every mod but DO NOT install any mods that change the UI Once done, start the game. You should to load your last save game. Just for good measure (and not to get your mods disabled, not tested), click on the Mods menu in-game, create a Bethesda.net account. Once that is done, press T to bring up the Load order. Check every mod by pressing enter. Once done, start your game. For some reason, installing any UI changing mods causes CTDs. Let me, or any else know if this works.