Votex has uninstalled all my mods

[Ziezue]

For some reason Vortex has uninstalled my 134 mods, some are disabled and some uninstalled (but this is just a phantom) all mods are still installed in the Data folder but not in Vortex, this only happens when switching games, the games this has happened to is Skyrim SE and Fallout 4, it has happened 3 times now and when you have 134 mods installed you can see how frustrating this can be to reinstall all the mods again, although that sounds strange because they did not really uninstall from the data folder, I am still able to play the game with all the mods install, why Vortex has decided to uninstall the mods from its platform is a mystery, anyone have any idea why this happens? and if so, can it be prevented?

 

Thanks

Ziezue