Followed "Through the Valleys" by PushTheWinButton guide.
I installed the Required mods and the NorthernUI/NorthernUI Wheel Hotkeys mods, nothing else.
I'm using an Xbox One Controller.
The only issue I have is scrolling through menus. The input from the D-pad is doubled and the Joystick is really sensitive. I'm able to scroll single menu options with the joystick if I push it very lightly. The D-pad scrolls 2 options at a time regardless of how lightly I press it.
I've already disabled Steam Controller Support and I don't have any other controller input software running.