So far, so good. Instead of letting Nexus reload all of my mods, I took the longer way around and reinstalled all my mods manually. The mods were still there, only they were all disabled. It just took a little time to enable something like a 150 or so mods. The only problem I found was that I had forgotten the order in which some of the extra plug ins occurred. Point in case being Ciries armor and sword had vanished, leaving my char naked. The files were still there, only missing visually, just as if I hadn't made them yet. Otherwise, no complaints, as the intro said, this may take a little time to complete.